Supporting data for "Low coverage sequencing of three echinoderm genomes: the brittle star Ophionereis fasciata, the sea star Patiriella regularis, and the sea cucumber Australostichopus mollis". ========== Long, K, A; Nossa, C, W; Sewell, M, A; Putnam, N, H; Ryan, J, F 2016, GigaScience Database. http://dx.doi.org/10.5524/100194 Summary ------- These data are the assembled draft genomes of the brittle star Ophionereis fasciata, the sea star Patiriella regularis, and the sea cucumber Australostichopus mollis from Illumina sequence data with coverages of 12.5x, 22.5x, and 21.4x, respectively. They accompany the GigaScience manuscript "Low coverage sequencing of three echinoderm genomes: the brittle star Ophionereis fasciata, the sea star Patiriella regularis, and the sea cucumber Australostichopus mollis" DOI:10.1186/s13742-016-0125-6 Files ----- Amol.01.aa.gz - Australostichopus mollis protein sequences of gene models (version 0.01) Amol.01.gff.gz - Australostichopus mollis augustus annotations (version 0.01) Australostichopus_mollis.0.01.fa - Australostichopus mollis genome assembly (version 0.01) Ofas.01.aa.gz - Ophionereis fasciata protein sequences of gene models (version 0.01) Ofas.01.gff.gz - Ophionereis fasciata augustus annotations (version 0.01) Ophionereis_fasciata_genome.0.01.fa - Ophionereis fasciata genome assembly (version 0.01) Patiriella_regularis_genome.0.01.fa - Patiriella regularis genome assembly (version 0.01) Preg.01.aa.gz - Patiriella regularis protein sequences of gene models (version 0.01) Preg.01.gff.gz - Ophionereis fasciata augustus annotations (version 0.01) Ophionereis_fasciata_genome.0.02.fa - Ophionereis fasciata genome assembly (version 0.02) Ofas.02.aa.gz - Ophionereis fasciata protein sequences of gene models (version 0.02) Ofas.02.gff.gz - Ophionereis fasciata augustus annotations (version 0.02) hum_v_Amol_AUGUSTUS_trained_w_gen.blastp.gz - BLASTP of HumRef2015 vs. Amol augustus predictions ran with --species=generic hum_v_Amol_AUGUSTUS_trained_w_hum.blastp.gz - BLASTP of HumRef2015 vs. Amol augustus predictions ran with --species=human hum_v_Amol_AUGUSTUS_trained_w_strong.blastp.gz - BLASTP of HumRef2015 vs. Amol augustus predictions ran with --species=strongylocentrotus_purpuratus hum_v_Ofas_AUGUSTUS_trained_w_gen.blastp.gz - BLASTP of HumRef2015 vs. Ofas augustus predictions ran with --species=generic hum_v_Ofas_AUGUSTUS_trained_w_hum.blastp.gz - BLASTP of HumRef2015 vs. Ofas augustus predictions ran with --species=human hum_v_Ofas_AUGUSTUS_trained_w_spur.blastp.gz - BLASTP of HumRef2015 vs. Ofas augustus predictions ran with --species=strongylocentrotus_purpuratus hum_v_Preg_AUGUSTUS_trained_w_gen.blastp.gz - BLASTP of HumRef2015 vs. Preg augustus predictions ran with --species=generic hum_v_Preg_AUGUSTUS_trained_w_hum.blastp.gz - BLASTP of HumRef2015 vs. Preg augustus predictions ran with --species=human hum_v_Preg_AUGUSTUS_trained_w_strong.blastp.gz - BLASTP of HumRef2015 vs. Preg augustus predictions ran with --species=strongylocentrotus_purpuratus spur_v_Amol_AUGUSTUS_trained_w_gen.blastp.gz - BLASTP of S. purpuratus vs. Amol augustus predictions ran with --species=generic spur_v_Amol_AUGUSTUS_trained_w_hum.blastp.gz - BLASTP of S. purpuratus vs. Amol augustus predictions ran with --species=human spur_v_Amol_AUGUSTUS_trained_w_strong.blastp.gz - BLASTP of S. purpuratus vs. Amol augustus predictions ran with --species=strongylocentrotus_purpuratus spur_v_Ofas_AUGUSTUS_trained_w_gen.blastp.gz - BLASTP of S. purpuratus vs. Ofas augustus predictions ran with --species=generic spur_v_Ofas_AUGUSTUS_trained_w_hum.blastp.gz - BLASTP of S. purpuratus vs. Ofas augustus predictions ran with --species=human spur_v_Ofas_AUGUSTUS_trained_w_spur.blastp.gz - BLASTP of S. purpuratus vs. Ofas augustus predictions ran with --species=strongylocentrotus_purpuratus spur_v_Preg_AUGUSTUS_trained_w_gen.blastp.gz - BLASTP of S. purpuratus vs. Preg augustus predictions ran with --species=generic spur_v_Preg_AUGUSTUS_trained_w_hum.blastp.gz - BLASTP of S. purpuratus vs. Preg augustus predictions ran with --species=human spur_v_Preg_AUGUSTUS_trained_w_strong.blastp.gz - BLASTP of S. purpuratus vs. Preg augustus predictions ran with --species=strongylocentrotus_purpuratus